Electrum
Metaboverse
XPRESSyourself
Electrum is an interactive web browser tool for exploring MIDAS protein-metabolite interaction data.
Integrating multi- or single-omic metabolic data upon the metabolic network can be challenging for a variety of reasons. Metaboverse seeks to simplify this task for users by providing a simple, user-friendly interface for layering their data on a dynamic representation of the metabolic network and automatically searching the network for interesting regulatory or other patterns.
XPRESSyourself aims to use and curate the most current and robust software packages required to process and analyze ribosome profiling and bulk RNA-sequencing.
MetaboNet
We curated and adapted the latest systemic model of human metabolism and developed customizable tools to define metabolic networks with and without compartmentalization in subcellular organelles and with or without inclusion of prolific metabolite hubs.